Methylocystis rosea strain GW6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylocystaceae

Genus

Methylocystis

Description

Methylocystis rosea strain GW6 is a Gram-negative bacterium characterized by its unique genetic structure, which includes three replicons. This distinctive feature may contribute to its adaptability and metabolic diversity within its ecological niche. The strain is cataloged under three specific accessions: NZ_CP034087.1, NZ_CP034088.1, and NZ_CP034086.1, which provide a basis for further genomic analysis and comparison with related species. Methylocystis rosea is part of the Methylocystis genus, which is known for its ability to utilize methane as a carbon source, playing a significant role in the carbon cycle, particularly in environments rich in methane. The ecological significance of this strain lies in its potential applications in bioremediation and environmental management, particularly in reducing greenhouse gas emissions by metabolizing methane. The presence of multiple replicons in its genome may enhance the organism’s versatility, allowing it to adapt to various environmental conditions. This adaptability could be crucial in fluctuating environments where methane levels vary, such as wetlands or areas affected by human activity. Understanding the genetic and metabolic capabilities of Methylocystis rosea strain GW6 can provide insights into its ecological roles and potential applications in sustainable practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylocystaceae
GenusMethylocystis
SpeciesMethylocystis rosea
Strainstrain GW6

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylocystis rosea strain GW6 plasmid pGW6_1, complete sequence.

Gene Summary

Adenine Count

69158 bp

Thymine Count

68629 bp

Guanine Count

105043 bp

Cytosine Count

105139 bp

Genome Length

347969 bp

Protein-coding Genes

313 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2285 domain-containing proteinEHO51_RS17625Not AvailablePositive3609357 - 360994721664.9
helix-turn-helix transcriptional regulatorEHO51_RS17630Not AvailablePositive3610106 - 361038710109.2
replication initiator protein aEHO51_RS17635Not AvailablePositive3610401 - 361132435138.1
hypothetical proteinEHO51_RS17640Not AvailableNegative3611438 - 36117109890.65
duf2840 domain-containing proteinEHO51_RS17645Not AvailablePositive3611746 - 361221017665.4
s26 family signal peptidaseEHO51_RS17650Not AvailablePositive3612213 - 361271618103.0
lytic transglycosylase domain-containing proteinEHO51_RS17655Not AvailablePositive3612716 - 361356430506.7
relaxase/mobilization nuclease domain-containing proteinEHO51_RS17660Not AvailablePositive3613808 - 361554763138.2
imma/irre family metallo-endopeptidaseEHO51_RS17665Not AvailableNegative3615573 - 361647533303.2
helix-turn-helix domain-containing proteinEHO51_RS17670Not AvailableNegative3616503 - 361688313984.6

Displaying genes 3851 – 3860 of 4100 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.