Methylocystis rosea strain GW6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylocystaceae

Genus

Methylocystis

Description

Methylocystis rosea strain GW6 is a Gram-negative bacterium characterized by its unique genetic structure, which includes three replicons. This distinctive feature may contribute to its adaptability and metabolic diversity within its ecological niche. The strain is cataloged under three specific accessions: NZ_CP034087.1, NZ_CP034088.1, and NZ_CP034086.1, which provide a basis for further genomic analysis and comparison with related species. Methylocystis rosea is part of the Methylocystis genus, which is known for its ability to utilize methane as a carbon source, playing a significant role in the carbon cycle, particularly in environments rich in methane. The ecological significance of this strain lies in its potential applications in bioremediation and environmental management, particularly in reducing greenhouse gas emissions by metabolizing methane. The presence of multiple replicons in its genome may enhance the organism’s versatility, allowing it to adapt to various environmental conditions. This adaptability could be crucial in fluctuating environments where methane levels vary, such as wetlands or areas affected by human activity. Understanding the genetic and metabolic capabilities of Methylocystis rosea strain GW6 can provide insights into its ecological roles and potential applications in sustainable practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylocystaceae
GenusMethylocystis
SpeciesMethylocystis rosea
Strainstrain GW6

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylocystis rosea strain GW6 plasmid pGW6_1, complete sequence.

Gene Summary

Adenine Count

69158 bp

Thymine Count

68629 bp

Guanine Count

105043 bp

Cytosine Count

105139 bp

Genome Length

347969 bp

Protein-coding Genes

313 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseEHO51_RS09400Not AvailableNegative1931141 - 193256850467.9
phospho-n-acetylmuramoyl-pentapeptide- transferaseEHO51_RS09405Not AvailableNegative1932571 - 193365338649.4
udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligaseEHO51_RS09410Not AvailableNegative1933663 - 193508149709.7
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseEHO51_RS09415Not AvailableNegative1935078 - 193652950620.6
peptidoglycan d,d-transpeptidase ftsi family proteinEHO51_RS09420Not AvailableNegative1936529 - 193830463829.4
hypothetical proteinEHO51_RS09425Not AvailableNegative1938301 - 193871415118.4
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhEHO51_RS09430Not AvailableNegative1938714 - 193971836344.4
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive1940050 - 1940430Not Available
small metal-binding protein smbpEHO51_RS09440Not AvailablePositive1940598 - 194096013082.5
nad(p)/fad-dependent oxidoreductaseEHO51_RS09445Not AvailablePositive1941210 - 194246645311.1

Displaying genes 2261 – 2270 of 4100 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.