Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga sp. H8 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960946 bp
Thymine Count
969016 bp
Guanine Count
2034415 bp
Cytosine Count
2028846 bp
Genome Length
5993223 bp
Protein-coding Genes
5606 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath large subunit | EGT29_RS04780 | Not Available | Negative | 998378 - 999865 | 54483.9 |
| type vi secretion system contractile sheath small subunit | EGT29_RS04785 | Not Available | Negative | 999892 - 1000410 | 19608.4 |
| type ii toxin-antitoxin system rele/pare family toxin | EGT29_RS04790 | Not Available | Positive | 1000659 - 1001018 | 13411.3 |
| helix-turn-helix domain-containing protein | EGT29_RS04795 | Not Available | Positive | 1001021 - 1001353 | 12321.0 |
| type vi secretion system protein tssa | EGT29_RS04800 | Not Available | Negative | 1001361 - 1002449 | 38618.4 |
| type vi secretion protein icmf/tssm n-terminal domain-containing protein | EGT29_RS04805 | Not Available | Negative | 1002466 - 1006047 | 131178.0 |
| dotu family type iv/vi secretion system protein | EGT29_RS04810 | Not Available | Negative | 1006052 - 1007389 | 49228.6 |
| type vi secretion system baseplate subunit tssk | EGT29_RS04815 | Not Available | Negative | 1007417 - 1008838 | 52603.1 |
| trab/gumn family protein | EGT29_RS04820 | Not Available | Negative | 1008870 - 1009841 | 35684.0 |
| response regulator transcription factor | EGT29_RS04825 | Not Available | Positive | 1010030 - 1010695 | 23589.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
