Chryseobacterium shandongense strain H5143

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium shandongense strain H5143 is a rod-shaped bacterium identified within the genus Chryseobacterium. This strain is characterized by a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The complete genomic sequence of this strain is available under the accession number NZ_CP033912.1, providing a resource for further research and analysis. Chryseobacterium species, including strain H5143, are often found in diverse habitats, which suggests a potential ecological versatility. Members of this genus are known for their ability to degrade complex organic materials, indicating a role in nutrient cycling. This trait could be particularly significant in environments where organic matter is abundant, as they may contribute to the decomposition process and the subsequent release of nutrients back into the ecosystem. The rod shape of Chryseobacterium shandongense strain H5143 may also influence its motility and interaction with other microorganisms in its habitat. The streamlined genetic structure, combined with its ecological traits, supports the idea that strain H5143 may play an important role in its environment, particularly in the degradation of organic materials and the maintenance of microbial diversity. Understanding the specific functions and interactions of this strain could provide insights into its ecological significance and potential applications in bioremediation or agricultural contexts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium shandongense
Strainstrain H5143

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium shandongense strain H5143 chromosome, complete

Gene Summary

Adenine Count

1439018 bp

Thymine Count

1437326 bp

Guanine Count

841211 bp

Cytosine Count

841157 bp

Genome Length

4558712 bp

Protein-coding Genes

4053 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydropteroate synthaseEG353_RS03940Not AvailableNegative922091 - 92286428965.1
duf1599 domain-containing proteinEG353_RS03945Not AvailablePositive923167 - 92373021973.1
bt_3928 family proteinEG353_RS03950Not AvailablePositive923737 - 92484642250.2
terb family tellurite resistance proteinEG353_RS03955Not AvailablePositive924892 - 92524213669.2
triose-phosphate isomeraseEG353_RS03960Not AvailablePositive925320 - 92607827787.1
type 1 glutamine amidotransferase domain-containing proteinEG353_RS03965Not AvailableNegative926164 - 92671220134.5
atp-dependent clp endopeptidase proteolytic subunit clppEG353_RS03970Not AvailableNegative927171 - 92785725388.7
dna primaseEG353_RS03975Not AvailableNegative927969 - 92994875602.9
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeEG353_RS03980Not AvailablePositive930075 - 93048215867.8
alanine dehydrogenaseEG353_RS03985Not AvailablePositive930551 - 93174444268.1

Displaying genes 851 – 860 of 4157 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.