Chryseobacterium shandongense strain H5143

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium shandongense strain H5143 is a rod-shaped bacterium identified within the genus Chryseobacterium. This strain is characterized by a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The complete genomic sequence of this strain is available under the accession number NZ_CP033912.1, providing a resource for further research and analysis. Chryseobacterium species, including strain H5143, are often found in diverse habitats, which suggests a potential ecological versatility. Members of this genus are known for their ability to degrade complex organic materials, indicating a role in nutrient cycling. This trait could be particularly significant in environments where organic matter is abundant, as they may contribute to the decomposition process and the subsequent release of nutrients back into the ecosystem. The rod shape of Chryseobacterium shandongense strain H5143 may also influence its motility and interaction with other microorganisms in its habitat. The streamlined genetic structure, combined with its ecological traits, supports the idea that strain H5143 may play an important role in its environment, particularly in the degradation of organic materials and the maintenance of microbial diversity. Understanding the specific functions and interactions of this strain could provide insights into its ecological significance and potential applications in bioremediation or agricultural contexts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium shandongense
Strainstrain H5143

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium shandongense strain H5143 chromosome, complete

Gene Summary

Adenine Count

1439018 bp

Thymine Count

1437326 bp

Guanine Count

841211 bp

Cytosine Count

841157 bp

Genome Length

4558712 bp

Protein-coding Genes

4053 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphohydrolaseEG353_RS01075Not AvailablePositive232220 - 23266617632.2
duf2490 domain-containing proteinEG353_RS01080Not AvailableNegative232718 - 23344928372.9
tonb-dependent receptor plug domain-containing proteinEG353_RS01085Not AvailableNegative233525 - 23533668825.0
excinuclease abc subunit uvraEG353_RS01090Not AvailablePositive235686 - 238478104485.0
aminotransferase class v-fold plp-dependent enzymeEG353_RS01095Not AvailableNegative238594 - 23976943898.2
hypothetical proteinEG353_RS01100Not AvailableNegative239926 - 24106543153.4
tssn family type vi secretion system proteinEG353_RS01105Not AvailableNegative241078 - 24199235606.9
type vi secretion system baseplate subunit tssgEG353_RS01110Not AvailableNegative242048 - 24298936717.9
s1/p1 nucleaseEG353_RS01115Not AvailablePositive243306 - 24409730414.2
rna polymerase sigma factor rpod/sigaEG353_RS01120Not AvailablePositive245400 - 24626633002.8

Displaying genes 271 – 280 of 4157 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.