Corynebacterium choanae strain 200CH

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Corynebacteriaceae

Genus

Corynebacterium

Description

Corynebacterium choanae strain 200CH is characterized by a single replicon, suggesting a streamlined genomic structure. The strain is cataloged under the accession number NZ_CP033896.1, which provides a reference point for researchers interested in its genetic makeup and potential applications. Corynebacterium choanae is part of the diverse Corynebacterium genus, known for its varied ecological roles, including both pathogenic and non-pathogenic species. The specific traits of strain 200CH may contribute to understanding its ecological niche or potential interactions within microbial communities. Given its classification, it is likely involved in various biological processes, potentially influencing host-microbe interactions or contributing to the overall microbiome dynamics in its environment. The presence of a single replicon may also imply specific evolutionary advantages, such as efficient replication and adaptability to environmental changes. Understanding the genomic features of strain 200CH can provide insights into its metabolic capabilities and interactions with other microorganisms. As research progresses, this strain may reveal important information regarding its role in health and disease, particularly in the context of its ecological interactions.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyCorynebacteriaceae
GenusCorynebacterium
SpeciesCorynebacterium choanae
Strainstrain 200CH

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Corynebacterium choanae strain 200CH
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corynebacterium choanae strain 200CH chromosome, complete genome.

Gene Summary

Adenine Count

639060 bp

Thymine Count

644141 bp

Guanine Count

852919 bp

Cytosine Count

850653 bp

Genome Length

2986773 bp

Protein-coding Genes

2086 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
preprotein translocase subunit secaCCHOA_RS02305Not AvailablePositive630612 - 63326099686.8
hypothetical proteinCCHOA_RS02310Not AvailableNegative633477 - 63442734141.3
had family hydrolaseCCHOA_RS02315Not AvailablePositive634981 - 63539714976.8
duf6912 family proteinCCHOA_RS02320Not AvailablePositive635417 - 63593218282.6
chloride channel proteinCCHOA_RS02325Not AvailableNegative636256 - 63820267707.5
ribosome small subunit-dependent gtpase aCCHOA_RS02330Not AvailableNegative638450 - 63945736113.1
3-phosphoshikimate 1-carboxyvinyltransferaseCCHOA_RS02335Not AvailableNegative639657 - 64105747998.4
sos response-associated peptidaseCCHOA_RS02340Not AvailablePositive641225 - 64201028113.7
ybak/ebsc family proteinCCHOA_RS02345Not AvailableNegative642126 - 64264417514.2
sigma-70 family rna polymerase sigma factorCCHOA_RS02350Not AvailablePositive643084 - 64369222921.1

Displaying genes 461 – 470 of 2152 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.