Corynebacterium choanae strain 200CH

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Corynebacteriaceae

Genus

Corynebacterium

Description

Corynebacterium choanae strain 200CH is characterized by a single replicon, suggesting a streamlined genomic structure. The strain is cataloged under the accession number NZ_CP033896.1, which provides a reference point for researchers interested in its genetic makeup and potential applications. Corynebacterium choanae is part of the diverse Corynebacterium genus, known for its varied ecological roles, including both pathogenic and non-pathogenic species. The specific traits of strain 200CH may contribute to understanding its ecological niche or potential interactions within microbial communities. Given its classification, it is likely involved in various biological processes, potentially influencing host-microbe interactions or contributing to the overall microbiome dynamics in its environment. The presence of a single replicon may also imply specific evolutionary advantages, such as efficient replication and adaptability to environmental changes. Understanding the genomic features of strain 200CH can provide insights into its metabolic capabilities and interactions with other microorganisms. As research progresses, this strain may reveal important information regarding its role in health and disease, particularly in the context of its ecological interactions.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyCorynebacteriaceae
GenusCorynebacterium
SpeciesCorynebacterium choanae
Strainstrain 200CH

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Corynebacterium choanae strain 200CH
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corynebacterium choanae strain 200CH chromosome, complete genome.

Gene Summary

Adenine Count

639060 bp

Thymine Count

644141 bp

Guanine Count

852919 bp

Cytosine Count

850653 bp

Genome Length

2986773 bp

Protein-coding Genes

2086 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prenyltransferaseCCHOA_RS00105Not AvailableNegative26217 - 2710131769.2
lycopene cyclase domain-containing proteinCCHOA_RS00110Not AvailableNegative27176 - 2750211989.2
lycopene cyclase domain-containing proteinCCHOA_RS00115Not AvailableNegative27499 - 2787313968.4
phytoene desaturase family proteinCCHOA_RS00120Not AvailableNegative28006 - 2970661469.1
glycosyltransferase family 2 proteinCCHOA_RS00125Not AvailableNegative29976 - 3079729908.8
Trna-leuNot AvailableNot AvailablePositive31175 - 31261Not Available
duf3662 and fha domain-containing proteinCCHOA_RS00135Not AvailablePositive31700 - 3287841331.8
fha domain-containing proteinCCHOA_RS00140Not AvailablePositive33284 - 3373616110.7
pp2c family protein-serine/threonine phosphataseCCHOA_RS00145Not AvailablePositive33733 - 3537357038.5
gamma-glutamyl-gamma-aminobutyrate hydrolase family proteinCCHOA_RS00150Not AvailablePositive35628 - 3677540964.6

Displaying genes 21 – 30 of 2152 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.