Gardnerella vaginalis strain FDAARGOS_568

Gram-positiveRodNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Gardnerella

Description

Gardnerella vaginalis strain FDAARGOS_568 is a Gram-positive, rod-shaped bacterium that is classified as a chemoheterotroph, relying on organic compounds for energy. This strain is anaerobic, indicating that it thrives in environments devoid of oxygen. It has a single membrane and one replicon, characteristic of many bacteria. Gardnerella vaginalis is not mobile and does not produce flagella. This strain is notable for its association with various hosts, including Homo sapiens (humans), Metazoa (a broad category of multicellular organisms), and Oryctolagus cuniculus (the European rabbit). Its habitat is primarily host-associated, suggesting a close relationship with these organisms. Gardnerella vaginalis strain FDAARGOS_568 is implicated in several health conditions, particularly urinary tract infections (UTIs), pyogenic osteomyelitis, and bacterial vaginosis (BV), a common condition in women. The strain's pathogenicity in humans highlights its potential impact on health, particularly in relation to reproductive and urinary systems. The optimal growth temperature for this strain is 37°C, which aligns with the typical human body temperature, indicating its adaptation to the human host. As a nonsporulating bacterium, it does not form spores, which may affect its survival and transmission dynamics. In summary, Gardnerella vaginalis strain FDAARGOS_568 exemplifies a bacterium that is well-adapted to human hosts, contributing to specific health issues. Its anaerobic nature and association with various hosts underscore its ecological role in the human microbiome and its potential impact on human health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusGardnerella
SpeciesGardnerella vaginalis
Strainstrain FDAARGOS_568

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Gardnerella vaginalis strain FDAARGOS_568
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Oryctolagus cuniculus
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Gardnerella vaginalis strain FDAARGOS_568 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1311 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3039 domain-containing proteinEGX90_RS07395Not AvailableNegative1607309 - 160765612755.7
cysteine--trna ligaseEGX90_RS06980Not AvailablePositive1607796 - 160938558366.9
signal recognition particle proteinEGX90_RS06985Not AvailablePositive1609458 - 161115860611.7
endonuclease/exonuclease/phosphatase family proteinEGX90_RS06990Not AvailablePositive1611184 - 161224538938.1
30s ribosomal protein s16EGX90_RS06995Not AvailablePositive1613006 - 161346716572.6
rna-binding proteinEGX90_RS07000Not AvailablePositive1613470 - 16137038706.58
ribosome maturation factor rimmEGX90_RS07005Not AvailablePositive1613712 - 161429621550.8
trna (guanosine(37)-n1)-methyltransferase trmdEGX90_RS07010Not AvailablePositive1614329 - 161515930704.2
16s rrna (guanine(966)-n(2))-methyltransferase rsmdEGX90_RS07020Not AvailableNegative1615544 - 161612520984.0
nucleoside hydrolaseEGX90_RS07025Not AvailablePositive1616357 - 161729533860.8

Displaying genes 1321 – 1330 of 1387 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Pyogenic osteomyelitisCausesPMC7852921
Bacterial vaginosisCausesPMC11597594
Bacterial vaginosisCausesPMC11782042
UtisCausesPMC11782042
Bacterial vaginosisCausesPMC12054147
BvCausesPMC12519793
BvCausesPMC12800088
Bacterial vaginosisCausesPMC13228082
BvCausesPMC13228082
Bacterial vaginosisCausesPMC12281154

Displaying health effects 1 – 10 of 11 in total