Yersinia pseudotuberculosis strain FDAARGOS_581

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia pseudotuberculosis strain FDAARGOS_581 is a gram-negative, rod-shaped bacterium that serves as a facultative anaerobe, thriving in diverse habitats. This strain is classified as a heterotroph, deriving its energy from organic compounds. Notably, it possesses flagella, granting it mobility, and typically exists as single cells. This strain exhibits mesophilic characteristics, with an optimal growth temperature of 28°C, allowing it to thrive in moderate temperature environments. Yersinia pseudotuberculosis has one replicon and possesses a dual membrane structure, which is characteristic of gram-negative bacteria. The bacterium is known to engage in a free-living biotic relationship and can infect multiple hosts, including Homo sapiens (humans), Sus scrofa (pigs), Daucus carota (carrots), Aves (birds), and Acanthamoeba castellanii (a type of amoeba). It is associated with several health effects in humans, including bacteremia, liver abscess, sepsis, diarrhea, gastroenteritis, septic shock, and yersiniosis, among others. The organism's pathogenicity is well-documented, leading to severe gastrointestinal diseases and complications such as multiple organ dysfunction syndrome (MODS) and acute kidney and liver injuries. The ecological insight that emerges from the characteristics of Yersinia pseudotuberculosis strain FDAARGOS_581 is its adaptability to various environments and hosts, highlighting its potential role in zoonotic transmission and the complexity of its interactions with both human and non-human hosts. Such traits underline the importance of monitoring this pathogen in public health contexts to mitigate its impact on human health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia pseudotuberculosis
Strainstrain FDAARGOS_581

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Yersinia pseudotuberculosis strain FDAARGOS_581
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Sus scrofa
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Yersinia pseudotuberculosis strain FDAARGOS_581 plasmid unnamed,

Gene Summary

Adenine Count

19472 bp

Thymine Count

19175 bp

Guanine Count

15285 bp

Cytosine Count

16103 bp

Genome Length

70035 bp

Protein-coding Genes

93 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion chaperone sycnEGX47_RS00260Not AvailablePositive35618 - 3598913609.6
type iii secretion system protein yscxEGX47_RS00265Not AvailablePositive35986 - 3635413756.5
type iii secretion system chaperone yscyEGX47_RS00270Not AvailablePositive36351 - 3669513117.7
sctv family type iii secretion system export apparatus subunit lcrdEGX47_RS00275Not AvailablePositive36682 - 3879677806.7
type iii secretion system chaperone lcrrEGX47_RS00280Not AvailablePositive38793 - 3923316481.2
type iii secretion system chaperone lcrgEGX47_RS00285Not AvailablePositive39275 - 3956211020.3
type iii secretion system needle tip protein lcrvEGX47_RS00290Not AvailablePositive39564 - 4054737390.3
type iii secretion system chaperone sycd/lcrhEGX47_RS00295Not AvailablePositive40608 - 4111419011.6
type iii secretion system translocon subunit yopbEGX47_RS00300Not AvailablePositive41092 - 4229741797.7
type iii secretion system translocon subunit yopdEGX47_RS00305Not AvailablePositive42316 - 4323633389.1

Displaying genes 51 – 60 of 93 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
GastroenteritisCausesPMC11654157
PseudoappendicitisCausesPMC11654157
Multiple organ dysfunction syndromeCausesPMC11654157
ModsCausesPMC11654157
Liver abscessCausesPMC11654157
Splenic infarctionCausesPMC11654157
SepsisCausesPMC11654157
Septic shockCausesPMC11654157
Acute kidney injuryCausesPMC11654157
Acute liver injuryCausesPMC11654157

Displaying health effects 1 – 10 of 19 in total