Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
35708 bp
Thymine Count
35961 bp
Guanine Count
60664 bp
Cytosine Count
59578 bp
Genome Length
191911 bp
Protein-coding Genes
191 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein virb3 | EBF16_RS03950 | Not Available | Positive | 52452 - 52796 | 12305.2 |
| virb4 family type iv secretion/conjugal transfer atpase | EBF16_RS03955 | Not Available | Positive | 52783 - 55167 | 89883.6 |
| type iv secretion system protein | EBF16_RS03960 | Not Available | Positive | 55181 - 55894 | 25464.1 |
| hypothetical protein | EBF16_RS03965 | Not Available | Positive | 55897 - 56202 | 11076.6 |
| type iv secretion system protein | EBF16_RS03970 | Not Available | Positive | 56243 - 57259 | 35880.9 |
| hypothetical protein | EBF16_RS03975 | Not Available | Positive | 57270 - 57590 | 10825.0 |
| virb8 family protein | EBF16_RS03980 | Not Available | Positive | 57600 - 58283 | 25149.7 |
| trbg/virb9 family p-type conjugative transfer protein | EBF16_RS03985 | Not Available | Positive | 58280 - 59122 | 31044.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

