Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
35708 bp
Thymine Count
35961 bp
Guanine Count
60664 bp
Cytosine Count
59578 bp
Genome Length
191911 bp
Protein-coding Genes
191 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | EBF16_RS03735 | Not Available | Negative | 18419 - 18670 | 9066.96 |
| single-stranded dna-binding protein | EBF16_RS03740 | Not Available | Negative | 18779 - 19093 | 11608.5 |
| recombinase family protein | EBF16_RS03745 | Not Available | Negative | 19485 - 20183 | 25442.5 |
| sigma factor-like helix-turn-helix dna-binding protein | EBF16_RS03750 | Not Available | Negative | 20173 - 20907 | 27649.0 |
| helix-turn-helix domain-containing protein | EBF16_RS03755 | Not Available | Positive | 21099 - 21320 | 7543.96 |
| hypothetical protein | EBF16_RS03760 | Not Available | Positive | 21353 - 21613 | 9243.08 |
| transposase | EBF16_RS03765 | Not Available | Positive | 21909 - 23333 | 53193.9 |
| recombinase family protein | EBF16_RS03770 | Not Available | Negative | 23340 - 23906 | 20230.6 |
| class 1 integron integrase inti1 | EBF16_RS03780 | Not Available | Negative | 24204 - 25217 | 38383.4 |
| aminoglycoside nucleotidyltransferase ant(2'')-ia | EBF16_RS03785 | Not Available | Positive | 25363 - 25896 | 19874.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

