Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
35708 bp
Thymine Count
35961 bp
Guanine Count
60664 bp
Cytosine Count
59578 bp
Genome Length
191911 bp
Protein-coding Genes
191 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv conjugative transfer system protein trae | EBF16_RS03465 | Not Available | Positive | 158545 - 159168 | 22521.8 |
| type-f conjugative transfer system secretin trak | EBF16_RS03470 | Not Available | Positive | 159168 - 159962 | 27831.3 |
| trab/virb10 family protein | EBF16_RS03475 | Not Available | Positive | 159962 - 161338 | 47194.0 |
| dsbc family protein | EBF16_RS03480 | Not Available | Positive | 161349 - 162245 | 31661.1 |
| hypothetical protein | EBF16_RS03485 | Not Available | Positive | 162242 - 163393 | 38673.4 |
| type iv secretion system protein trac | EBF16_RS03490 | Not Available | Positive | 163400 - 166006 | 95909.7 |
| hypothetical protein | EBF16_RS03495 | Not Available | Positive | 166003 - 166365 | 13083.8 |
| type-f conjugative transfer system protein trbi | EBF16_RS03500 | Not Available | Positive | 166355 - 166936 | 19309.2 |
| s26 family signal peptidase | EBF16_RS03505 | Not Available | Positive | 166920 - 167462 | 19347.1 |
| type-f conjugative transfer system protein traw | EBF16_RS03510 | Not Available | Positive | 167459 - 168154 | 24681.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

