Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
35708 bp
Thymine Count
35961 bp
Guanine Count
60664 bp
Cytosine Count
59578 bp
Genome Length
191911 bp
Protein-coding Genes
191 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | EBF16_RS03415 | Not Available | Positive | 151933 - 152325 | 14282.9 |
| rraa family protein | EBF16_RS03420 | Not Available | Positive | 152318 - 153016 | 24107.7 |
| rraa family protein | EBF16_RS03425 | Not Available | Positive | 153009 - 153677 | 23342.1 |
| lytic transglycosylase domain-containing protein | EBF16_RS03430 | Not Available | Positive | 153858 - 154655 | 28743.6 |
| hypothetical protein | EBF16_RS03435 | Not Available | Negative | 154622 - 154897 | 9904.37 |
| hypothetical protein | EBF16_RS03440 | Not Available | Negative | 154908 - 155414 | 19057.9 |
| is1380 family transposase | EBF16_RS03445 | Not Available | Positive | 155629 - 156999 | 49601.6 |
| hypothetical protein | EBF16_RS03450 | Not Available | Negative | 157168 - 157527 | 13680.7 |
| hypothetical protein | EBF16_RS03455 | Not Available | Positive | 157867 - 158181 | 9836.19 |
| type iv conjugative transfer system protein tral | EBF16_RS03460 | Not Available | Positive | 158247 - 158531 | 10656.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

