Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
35708 bp
Thymine Count
35961 bp
Guanine Count
60664 bp
Cytosine Count
59578 bp
Genome Length
191911 bp
Protein-coding Genes
191 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EBF16_RS03215 | Not Available | Negative | 111719 - 113905 | 79308.2 |
| 2-hydroxychromene-2-carboxylate isomerase | EBF16_RS03220 | Not Available | Negative | 113942 - 114532 | 22156.4 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | EBF16_RS03225 | Not Available | Negative | 114529 - 115791 | 47181.7 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | EBF16_RS03230 | Not Available | Negative | 115816 - 116307 | 18448.0 |
| non-heme iron oxygenase ferredoxin subunit | EBF16_RS03235 | Not Available | Negative | 116304 - 116630 | 11370.5 |
| biphenyl-2,3-diol 1,2-dioxygenase | EBF16_RS03240 | Not Available | Negative | 116675 - 117574 | 33282.6 |
| rieske 2fe-2s domain-containing protein | EBF16_RS03245 | Not Available | Positive | 117806 - 119224 | 53165.6 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | EBF16_RS03250 | Not Available | Positive | 119221 - 119715 | 18931.0 |
| pdxa family protein | EBF16_RS03255 | Not Available | Positive | 119741 - 120691 | 32995.7 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | EBF16_RS03260 | Not Available | Positive | 120702 - 121982 | 46997.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

