Parasedimentitalea marina strain W43

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Parasedimentitalea

Description

Parasedimentitalea marina strain W43 is characterized by having four replicons, which are distinct pieces of DNA within its genome. This trait can suggest a complex genomic architecture that may provide the strain with various adaptations to its environment. The genomic organization is reflected in its accession numbers: NZ_CP033220.1, NZ_CP033221.1, NZ_CP033222.1, and NZ_CP033223.1, which correspond to the different replicons identified in its genome sequencing. The presence of multiple replicons may have implications for the strain's metabolic versatility and regulatory mechanisms, potentially allowing it to thrive in diverse ecological niches. Strain W43 is likely to exhibit unique physiological traits that enable its survival in marine environments, possibly including the ability to metabolize various substrates or withstand fluctuating salinity levels. Understanding the genomic structure of Parasedimentitalea marina strain W43 could provide insights into its ecological role in marine sediments, where it may contribute to biogeochemical cycles, such as carbon and nitrogen cycling. The adaptability suggested by its multi-replicon genome may facilitate interactions with other microbial communities, highlighting its potential significance in maintaining the health and balance of marine ecosystems. Further research into this strain could unveil its specific functions and interactions within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParasedimentitalea
SpeciesParasedimentitalea marina
Strainstrain W43

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parasedimentitalea marina strain W43 plasmid pW43B, complete

Gene Summary

Adenine Count

55021 bp

Thymine Count

54548 bp

Guanine Count

63482 bp

Cytosine Count

63975 bp

Genome Length

237026 bp

Protein-coding Genes

228 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate aminotransferase family proteinEBB79_RS23500Not AvailableNegative69453 - 7079048095.0
lysr family transcriptional regulatorEBB79_RS23505Not AvailablePositive70949 - 7191736094.4
amino acid abc transporter atp-binding proteinEBB79_RS23510Not AvailableNegative71932 - 7270528911.2
amino acid abc transporter permeaseEBB79_RS23515Not AvailableNegative72723 - 7337923897.1
amino acid abc transporter permeaseEBB79_RS23520Not AvailableNegative73399 - 7404623557.7
transporter substrate-binding domain-containing proteinEBB79_RS23525Not AvailableNegative74163 - 7494527481.0
aromatic ring-hydroxylating oxygenase subunit alphaEBB79_RS23530Not AvailablePositive75314 - 7645642934.0
aromatic ring-hydroxylating oxygenase subunit alphaEBB79_RS23535Not AvailablePositive76628 - 7775842160.7
tetr/acrr family transcriptional regulatorEBB79_RS23540Not AvailableNegative77799 - 7846424871.3
phytoene desaturase family proteinEBB79_RS23545Not AvailablePositive78605 - 8024259741.1

Displaying genes 571 – 580 of 653 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.