Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Yada domain-containing structural protein | EBA04_RS08915 | Not Available | Positive | 1750481 - 1751695 | 40761.8 |
| Is1404 transposase | EBA04_RS11435 | Not Available | Positive | 2347565 - 2348059 | 18713.5 |
| Hypothetical protein | EBA04_RS11440 | Not Available | Negative | 2348615 - 2348776 | 5967.96 |
| Attl | Not Available | Not Available | Positive | 2348822 - 2348857 | Not Available |
| Helix-turn-helix xre-family dna binding protein | EBA04_RS11445 | Not Available | Negative | 2348838 - 2349236 | 13886.0 |
| Hypothetical protein | EBA04_RS11450 | Not Available | Positive | 2349362 - 2349586 | 8009.85 |
| hypothetical protein | EBA04_RS23040 | Not Available | Positive | 2349583 - 2349756 | 6379.88 |
| hypothetical protein | EBA04_RS11455 | Not Available | Positive | 2349749 - 2349928 | 6598.88 |
| Putative replication initiation factor | EBA04_RS11460 | Not Available | Positive | 2349921 - 2350097 | 6580.61 |
| Probable site-specific integrase | EBA04_RS11465 | Not Available | Positive | 2350343 - 2351284 | 35633.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

