Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | EBA04_RS03305 | Not Available | Positive | 679551 - 680669 | 40026.1 |
| is630 family transposase | EBA04_RS03315 | Not Available | Positive | 681147 - 682178 | 38157.1 |
| dipeptidase | EBA04_RS03320 | Not Available | Negative | 682173 - 683289 | 40371.1 |
| glycoside hydrolase family 28 protein | EBA04_RS03325 | Not Available | Positive | 683480 - 684871 | 46901.6 |
| lytic murein transglycosylase b | EBA04_RS03330 | Not Available | Positive | 685140 - 686279 | 40934.8 |
| septal ring lytic transglycosylase rlpa family protein | EBA04_RS03335 | Not Available | Positive | 686276 - 687691 | 48341.3 |
| d-alanyl-d-alanine carboxypeptidase family protein | EBA04_RS03340 | Not Available | Positive | 688193 - 689398 | 43522.9 |
| dipeptidase | EBA04_RS03345 | Not Available | Negative | 689626 - 689745 | 4536.43 |
| dipeptidase | EBA04_RS03350 | Not Available | Positive | 689701 - 690351 | 21995.1 |
| ybed family protein | EBA04_RS03355 | Not Available | Positive | 690478 - 690756 | 10215.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

