Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase | EBA04_RS01950 | Not Available | Positive | 390017 - 390997 | 37023.6 |
| type iii secretion system effector xopw | EBA04_RS23430 | Not Available | Positive | 391173 - 391784 | 22581.0 |
| hypothetical protein | EBA04_RS01960 | Not Available | Positive | 391741 - 391968 | 7516.17 |
| dihydrolipoamide acetyltransferase family protein | EBA04_RS01965 | Not Available | Negative | 392022 - 393545 | 52197.4 |
| dipeptidase | EBA04_RS01970 | Not Available | Negative | 393542 - 393925 | 14082.2 |
| alpha-ketoacid dehydrogenase subunit beta | EBA04_RS01975 | Not Available | Negative | 393927 - 394997 | 38549.3 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | EBA04_RS01980 | Not Available | Negative | 394990 - 396078 | 39608.8 |
| dipeptidase | EBA04_RS01985 | Not Available | Negative | 396256 - 399824 | 126187.0 |
| tryptophan 2,3-dioxygenase | EBA04_RS01990 | Not Available | Positive | 400230 - 401123 | 34477.1 |
| peptide mfs transporter | EBA04_RS01995 | Not Available | Positive | 401566 - 403074 | 54038.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

