Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system protein sctp | EBA04_RS01725 | Not Available | Negative | 337709 - 338350 | 23779.4 |
| fhipep family type iii secretion protein | EBA04_RS01730 | Not Available | Negative | 338350 - 340272 | 69226.3 |
| type iii secretion system export apparatus subunit sctu | EBA04_RS01735 | Not Available | Negative | 340281 - 341354 | 39034.8 |
| hrpb1 family type iii secretion system apparatus protein | EBA04_RS01740 | Not Available | Positive | 341570 - 342025 | 15991.2 |
| type iii secretion protein hrpb2 | EBA04_RS01745 | Not Available | Positive | 342059 - 342451 | 13684.8 |
| type iii secretion system inner membrane ring lipoprotein sctj | EBA04_RS01750 | Not Available | Positive | 342453 - 343217 | 27487.0 |
| type iii secretion protein hrpb4 | EBA04_RS01755 | Not Available | Positive | 343225 - 343854 | 22331.9 |
| type iii secretion system stator protein sctl | EBA04_RS01760 | Not Available | Positive | 343839 - 344540 | 25371.9 |
| type iii secretion system atpase sctn | EBA04_RS01765 | Not Available | Positive | 344530 - 345858 | 47646.6 |
| type iii secretion protein hrpb7 | EBA04_RS01770 | Not Available | Positive | 345851 - 346360 | 18816.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

