Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4380 domain-containing protein | EBA04_RS22070 | Not Available | Negative | 4582391 - 4583482 | 39277.0 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | EBA04_RS22075 | Not Available | Negative | 4583715 - 4584530 | 29914.2 |
| is5 family transposase | EBA04_RS22080 | Not Available | Positive | 4584819 - 4586195 | 52148.6 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4586413 - 4586527 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4586701 - 4589583 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 4589811 - 4589887 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 4589907 - 4589982 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4590076 - 4591622 | Not Available |
| dipeptidase | EBA04_RS22110 | Not Available | Positive | 4592115 - 4592565 | 15877.6 |
| bacteriophytochrome bphp | EBA04_RS22115 | Not Available | Negative | 4592674 - 4594578 | 70381.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

