Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system effector xopf1 | EBA04_RS01675 | Not Available | Positive | 330095 - 332095 | 70304.5 |
| Ncrna_class:other | Not Available | Not Available | Positive | 332201 - 332277 | Not Available |
| cest family type iii secretion system chaperone | EBA04_RS01685 | Not Available | Negative | 332869 - 333339 | 17620.0 |
| hrpe family protein | EBA04_RS01690 | Not Available | Negative | 333394 - 333675 | 9597.33 |
| hrpd6 family protein | EBA04_RS01695 | Not Available | Negative | 333756 - 333998 | 8717.25 |
| hrpd5 family protein | EBA04_RS01700 | Not Available | Negative | 334008 - 334946 | 33495.7 |
| hypothetical protein | EBA04_RS01705 | Not Available | Negative | 334943 - 335770 | 30460.8 |
| type iii secretion system export apparatus subunit scts | EBA04_RS01710 | Not Available | Negative | 335767 - 336027 | 8992.29 |
| type iii secretion system export apparatus subunit sctr | EBA04_RS01715 | Not Available | Negative | 336032 - 336676 | 23489.7 |
| type iii secretion system cytoplasmic ring protein sctq | EBA04_RS01720 | Not Available | Negative | 336663 - 337616 | 33317.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

