Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | EBA04_RS20355 | Not Available | Negative | 4221955 - 4223229 | 44060.0 |
| radc family protein | EBA04_RS20360 | Not Available | Positive | 4223290 - 4224003 | 26182.4 |
| arginine--trna ligase | EBA04_RS20365 | Not Available | Positive | 4224091 - 4225779 | 61927.1 |
| spor domain-containing protein | EBA04_RS20370 | Not Available | Positive | 4225959 - 4226840 | 29438.7 |
| hypothetical protein | EBA04_RS20375 | Not Available | Positive | 4226847 - 4227326 | 16958.4 |
| sdr family nad(p)-dependent oxidoreductase | EBA04_RS20380 | Not Available | Positive | 4227418 - 4228173 | 26281.5 |
| dipeptidase | EBA04_RS20385 | Not Available | Negative | 4228358 - 4229400 | 37335.7 |
| type iii secretion system effector avirulence protein avrbs3 | EBA04_RS20390 | Not Available | Negative | 4229553 - 4233455 | 136171.0 |
| contractile injection system protein, vgrg/pvc8 family | EBA04_RS20395 | Not Available | Negative | 4233512 - 4233778 | 9942.92 |
| dipeptidase | EBA04_RS20400 | Not Available | Negative | 4233862 - 4234116 | 9424.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

