Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase family protein | EBA04_RS20035 | Not Available | Positive | 4163629 - 4164405 | 27630.1 |
| apc family permease | EBA04_RS20040 | Not Available | Positive | 4164402 - 4165718 | 46100.1 |
| Ncrna_class:other | Not Available | Not Available | Positive | 4165787 - 4165865 | Not Available |
| dipeptidase | EBA04_RS20050 | Not Available | Positive | 4165928 - 4166212 | 9207.15 |
| hypothetical protein | EBA04_RS20055 | Not Available | Positive | 4166385 - 4166717 | 12984.6 |
| inner membrane protein yiaa | EBA04_RS20060 | Not Available | Negative | 4166772 - 4167206 | 15662.3 |
| pqq-dependent sugar dehydrogenase | EBA04_RS20065 | Not Available | Positive | 4167391 - 4168569 | 41619.4 |
| Ncrna_class:other | Not Available | Not Available | Positive | 4168666 - 4168742 | Not Available |
| glycoside hydrolase family 3 n-terminal domain-containing protein | EBA04_RS20080 | Not Available | Negative | 4169109 - 4171280 | 77613.4 |
| dihydroneopterin aldolase | EBA04_RS20085 | Not Available | Negative | 4171509 - 4171865 | 13281.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

