Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate o-methyltransferase family protein | EBA04_RS18220 | Not Available | Positive | 3806307 - 3806963 | 24177.2 |
| tolc family outer membrane protein | EBA04_RS18225 | Not Available | Positive | 3806984 - 3808363 | 49640.3 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | EBA04_RS18230 | Not Available | Negative | 3808638 - 3809954 | 48499.7 |
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferase | EBA04_RS18235 | Not Available | Positive | 3810031 - 3810951 | 34965.5 |
| o-antigen ligase family protein | EBA04_RS18240 | Not Available | Negative | 3811184 - 3812518 | 47035.7 |
| glycosyltransferase | EBA04_RS18245 | Not Available | Negative | 3812499 - 3813611 | 39974.6 |
| zinc-finger domain-containing protein | EBA04_RS18250 | Not Available | Negative | 3813622 - 3813819 | 7102.39 |
| is5-like element isxo1 family transposase | EBA04_RS18255 | Not Available | Negative | 3814350 - 3815318 | 36211.7 |
| is30 family transposase | EBA04_RS18265 | Not Available | Positive | 3815500 - 3816516 | 38547.4 |
| dipeptidase | EBA04_RS18270 | Not Available | Negative | 3816525 - 3816764 | 8821.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

