Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan editing factor pgef | EBA04_RS17165 | Not Available | Negative | 3580169 - 3580981 | 28730.4 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | EBA04_RS17170 | Not Available | Negative | 3580983 - 3581978 | 36094.3 |
| outer membrane protein assembly factor bamd | EBA04_RS17175 | Not Available | Positive | 3582099 - 3582980 | 33524.6 |
| nad+ synthase | EBA04_RS17180 | Not Available | Negative | 3583138 - 3584793 | 59822.9 |
| type ii toxin-antitoxin system rele/pare family toxin | EBA04_RS17185 | Not Available | Negative | 3584793 - 3585095 | 10884.1 |
| dipeptidase | EBA04_RS24115 | Not Available | Negative | 3585099 - 3585508 | 14882.8 |
| succinate--coa ligase subunit alpha | EBA04_RS17195 | Not Available | Negative | 3585612 - 3586487 | 29521.0 |
| adp-forming succinate--coa ligase subunit beta | EBA04_RS17200 | Not Available | Negative | 3586512 - 3587681 | 41415.0 |
| sensor histidine kinase | EBA04_RS17205 | Not Available | Positive | 3587915 - 3589528 | 59031.1 |
| sigma-54-dependent transcriptional regulator | EBA04_RS17210 | Not Available | Positive | 3589799 - 3591253 | 52492.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

