Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3574 domain-containing protein | EBA04_RS17115 | Not Available | Negative | 3565774 - 3566247 | 17208.4 |
| tonb-dependent receptor plug domain-containing protein | EBA04_RS17120 | Not Available | Positive | 3566484 - 3568919 | 87800.5 |
| type iii secretion system effector xopy | EBA04_RS17125 | Not Available | Positive | 3569377 - 3569991 | 21745.4 |
| trehalose-phosphatase | EBA04_RS17130 | Not Available | Positive | 3570197 - 3570955 | 27152.4 |
| glycoside hydrolase family 15 protein | EBA04_RS17135 | Not Available | Positive | 3571000 - 3572778 | 67266.6 |
| alpha,alpha-trehalose-phosphate synthase (udp-forming) | EBA04_RS17140 | Not Available | Positive | 3572775 - 3574142 | 50936.0 |
| glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenase | EBA04_RS17145 | Not Available | Positive | 3574784 - 3577222 | 86835.9 |
| dipeptidase | EBA04_RS23990 | Not Available | Positive | 3577905 - 3579070 | 43163.1 |
| dipeptidase | EBA04_RS17155 | Not Available | Negative | 3579222 - 3579655 | 15612.6 |
| duf4166 domain-containing protein | EBA04_RS17160 | Not Available | Negative | 3579642 - 3580166 | 20132.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

