Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ypjd | EBA04_RS16820 | Not Available | Positive | 3492668 - 3493459 | 28734.1 |
| aldose epimerase family protein | EBA04_RS16825 | Not Available | Negative | 3493746 - 3494795 | 37562.3 |
| alpha-n-arabinofuranosidase | EBA04_RS16830 | Not Available | Positive | 3495035 - 3496618 | 57957.9 |
| is5 family transposase | EBA04_RS16835 | Not Available | Negative | 3496806 - 3497604 | 30490.9 |
| dipeptidase | EBA04_RS23750 | Not Available | Positive | 3497646 - 3498594 | 34443.0 |
| response regulator | EBA04_RS16845 | Not Available | Negative | 3498699 - 3500654 | 70593.5 |
| sensor histidine kinase | EBA04_RS16850 | Not Available | Negative | 3500644 - 3501531 | 32491.9 |
| atp-binding protein | EBA04_RS16855 | Not Available | Negative | 3501528 - 3502538 | 34941.7 |
| anti-sigma regulatory factor | EBA04_RS16860 | Not Available | Negative | 3502529 - 3502924 | 13982.8 |
| stas domain-containing protein | EBA04_RS16865 | Not Available | Negative | 3502921 - 3503283 | 12952.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

