Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | EBA04_RS16710 | Not Available | Negative | 3469915 - 3470957 | 39927.5 |
| duf6624 domain-containing protein | EBA04_RS16720 | Not Available | Negative | 3471250 - 3472161 | 33488.1 |
| atp-dependent chaperone clpb | EBA04_RS16725 | Not Available | Negative | 3472286 - 3474871 | 95504.6 |
| giy-yig nuclease family protein | EBA04_RS16730 | Not Available | Positive | 3475317 - 3475622 | 11290.2 |
| dipeptidase | EBA04_RS16735 | Not Available | Positive | 3475630 - 3475778 | 5983.98 |
| dna mismatch repair protein muts | EBA04_RS16740 | Not Available | Positive | 3476062 - 3478617 | 93469.0 |
| duf937 domain-containing protein | EBA04_RS16745 | Not Available | Positive | 3478894 - 3479508 | 20315.3 |
| catalase/peroxidase hpi | EBA04_RS16750 | Not Available | Positive | 3479940 - 3482186 | 82043.8 |
| rna-binding s4 domain-containing protein | EBA04_RS16755 | Not Available | Negative | 3482310 - 3482717 | 14962.9 |
| mate family efflux transporter | EBA04_RS16760 | Not Available | Positive | 3483058 - 3484548 | 52684.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

