Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system vgr family protein | EBA04_RS13375 | Not Available | Positive | 2745577 - 2748339 | 96755.7 |
| duf4123 domain-containing protein | EBA04_RS13380 | Not Available | Positive | 2748346 - 2749335 | 36584.3 |
| t6ss effector bth_i2691 family protein | EBA04_RS13385 | Not Available | Positive | 2749347 - 2751845 | 90661.5 |
| hypothetical protein | EBA04_RS23970 | Not Available | Positive | 2751986 - 2752330 | 12543.3 |
| putative type vi secretion system effector | EBA04_RS13390 | Not Available | Positive | 2752327 - 2753070 | 26788.7 |
| is5 family transposase | EBA04_RS13395 | Not Available | Positive | 2753687 - 2755063 | 52160.7 |
| is3 family transposase | EBA04_RS13405 | Not Available | Positive | 2755463 - 2756505 | 39993.5 |
| dipeptidase | EBA04_RS24090 | Not Available | Positive | 2756539 - 2756631 | 3666.31 |
| protein translocase subunit secf | EBA04_RS13415 | Not Available | Negative | 2756713 - 2757681 | 35350.6 |
| protein translocase subunit secd | EBA04_RS13420 | Not Available | Negative | 2757795 - 2759639 | 65805.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

