Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trab/gumn family protein | EBA04_RS12880 | Not Available | Negative | 2630057 - 2631031 | 35694.6 |
| duf1684 domain-containing protein | EBA04_RS12885 | Not Available | Negative | 2631065 - 2632000 | 33835.4 |
| dna mismatch repair endonuclease mutl | EBA04_RS12890 | Not Available | Negative | 2632000 - 2633877 | 67823.3 |
| n-acetylmuramoyl-l-alanine amidase | EBA04_RS12895 | Not Available | Negative | 2634015 - 2635739 | 58056.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | EBA04_RS12900 | Not Available | Negative | 2635810 - 2636310 | 17870.2 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | EBA04_RS12905 | Not Available | Negative | 2636307 - 2637794 | 50403.5 |
| trna epoxyqueuosine(34) reductase queg | EBA04_RS12910 | Not Available | Positive | 2637819 - 2638886 | 39860.6 |
| exodeoxyribonuclease vii large subunit | EBA04_RS12915 | Not Available | Positive | 2639031 - 2640368 | 49096.1 |
| virulence factor | EBA04_RS12920 | Not Available | Negative | 2640664 - 2641926 | 45228.7 |
| Ncrna_class:other | Not Available | Not Available | Positive | 2642196 - 2642272 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

