Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase flavoprotein subunit | EBA04_RS11985 | Not Available | Negative | 2453461 - 2455251 | 65301.6 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | EBA04_RS11990 | Not Available | Negative | 2455285 - 2455671 | 13785.3 |
| succinate dehydrogenase, cytochrome b556 subunit | EBA04_RS11995 | Not Available | Negative | 2455668 - 2456063 | 14682.1 |
| ygfz/gcvt domain-containing protein | EBA04_RS12005 | Not Available | Positive | 2456333 - 2457205 | 30932.3 |
| Ncrna_class:other | Not Available | Not Available | Positive | 2457210 - 2457284 | Not Available |
| abc transporter atp-binding protein | EBA04_RS12015 | Not Available | Negative | 2457334 - 2458431 | 39634.3 |
| glucose-6-phosphate dehydrogenase | EBA04_RS12020 | Not Available | Positive | 2458854 - 2460284 | 52860.1 |
| glucokinase | EBA04_RS12025 | Not Available | Positive | 2460281 - 2461288 | 35556.7 |
| 6-phosphogluconolactonase | EBA04_RS12030 | Not Available | Positive | 2461285 - 2462004 | 25992.1 |
| phosphogluconate dehydratase | EBA04_RS12035 | Not Available | Positive | 2462107 - 2464023 | 67394.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

