Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssf | EBA04_RS11720 | Not Available | Negative | 2405436 - 2407313 | 69335.8 |
| type vi secretion system baseplate subunit tsse | EBA04_RS11725 | Not Available | Negative | 2407317 - 2407820 | 18697.4 |
| type vi secretion system accessory protein tagj | EBA04_RS11730 | Not Available | Negative | 2407808 - 2408641 | 30745.5 |
| hcp family type vi secretion system effector | EBA04_RS11735 | Not Available | Negative | 2408677 - 2409180 | 17857.8 |
| type vi secretion system contractile sheath large subunit | EBA04_RS11740 | Not Available | Negative | 2409280 - 2410794 | 56125.1 |
| type vi secretion system contractile sheath small subunit | EBA04_RS11745 | Not Available | Negative | 2410787 - 2411293 | 18198.7 |
| is5 family transposase | EBA04_RS11750 | Not Available | Positive | 2411638 - 2412436 | 30442.8 |
| dipeptidase | EBA04_RS11760 | Not Available | Negative | 2412639 - 2412782 | 5534.36 |
| dipeptidase | EBA04_RS11765 | Not Available | Negative | 2412778 - 2413800 | 37297.4 |
| hypothetical protein | EBA04_RS11770 | Not Available | Negative | 2413797 - 2414018 | 8172.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

