Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | EBA04_RS11265 | Not Available | Negative | 2241647 - 2242258 | 22396.3 |
| sensor histidine kinase | EBA04_RS11270 | Not Available | Negative | 2242255 - 2243277 | 35760.5 |
| efflux transporter outer membrane subunit | EBA04_RS11275 | Not Available | Negative | 2243396 - 2244880 | 51322.4 |
| efflux rnd transporter permease subunit | EBA04_RS11280 | Not Available | Negative | 2244877 - 2247969 | 111231.0 |
| efflux rnd transporter periplasmic adaptor subunit | EBA04_RS11285 | Not Available | Negative | 2247962 - 2249077 | 39320.6 |
| s8 family peptidase | EBA04_RS11295 | Not Available | Negative | 2249567 - 2252302 | 92954.3 |
| dipeptidase | EBA04_RS11300 | Not Available | Positive | 2253138 - 2253533 | 15232.4 |
| phage late control d family protein | EBA04_RS11305 | Not Available | Positive | 2253867 - 2254385 | 19158.1 |
| type iii secretion system effector avirulence protein avrbs3 | EBA04_RS11310 | Not Available | Positive | 2254442 - 2258746 | 149635.0 |
| type iii secretion system effector avirulence protein avrbs3 | EBA04_RS11315 | Not Available | Positive | 2258878 - 2261961 | 107890.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

