Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EBA04_RS10540 | Not Available | Positive | 2081207 - 2084362 | 115077.0 |
| bsubi/psti family type ii restriction endonuclease | EBA04_RS10545 | Not Available | Negative | 2084607 - 2084903 | 11235.4 |
| is5-like element isxo1 family transposase | EBA04_RS10550 | Not Available | Negative | 2085041 - 2086009 | 36456.9 |
| dipeptidase | EBA04_RS10555 | Not Available | Positive | 2086071 - 2086445 | 14346.7 |
| type iii secretion system effector xopav | EBA04_RS10560 | Not Available | Negative | 2086493 - 2087158 | 23745.1 |
| dipeptidase | EBA04_RS10565 | Not Available | Positive | 2087447 - 2088269 | 29470.9 |
| is3 family transposase | EBA04_RS10570 | Not Available | Positive | 2088322 - 2089544 | 46594.4 |
| paar domain-containing protein | EBA04_RS10575 | Not Available | Positive | 2089682 - 2090041 | 12388.9 |
| duf4123 domain-containing protein | EBA04_RS10580 | Not Available | Positive | 2090077 - 2090547 | 17454.7 |
| hypothetical protein | EBA04_RS10585 | Not Available | Positive | 2090528 - 2090869 | 12502.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

