Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | EBA04_RS09435 | Not Available | Positive | 1853038 - 1853856 | 28526.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1853916 - 1853989 | Not Available |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | EBA04_RS09445 | Not Available | Positive | 1854012 - 1854503 | 17269.7 |
| trna pseudouridine(13) synthase trud | EBA04_RS09450 | Not Available | Positive | 1854624 - 1855733 | 40567.0 |
| smr/muts family protein | EBA04_RS09455 | Not Available | Negative | 1855987 - 1856526 | 19636.3 |
| 5'/3'-nucleotidase sure | EBA04_RS09460 | Not Available | Positive | 1856626 - 1857405 | 27392.4 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | EBA04_RS09465 | Not Available | Positive | 1857402 - 1858079 | 24283.5 |
| yqaa family protein | EBA04_RS09470 | Not Available | Positive | 1858098 - 1858712 | 22273.9 |
| peptidoglycan dd-metalloendopeptidase family protein | EBA04_RS09475 | Not Available | Positive | 1858709 - 1859482 | 26614.8 |
| mth938-like domain-containing protein | EBA04_RS09480 | Not Available | Negative | 1859675 - 1860049 | 13406.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

