Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(55) synthase trub | EBA04_RS08320 | Not Available | Positive | 1660204 - 1661130 | 32569.5 |
| 30s ribosomal protein s15 | EBA04_RS08325 | Not Available | Positive | 1661287 - 1661547 | 10097.3 |
| polyribonucleotide nucleotidyltransferase | EBA04_RS08330 | Not Available | Positive | 1661714 - 1663828 | 75468.9 |
| duf2272 domain-containing protein | EBA04_RS08335 | Not Available | Negative | 1664202 - 1665242 | 36899.9 |
| carboxylating nicotinate-nucleotide diphosphorylase | EBA04_RS08340 | Not Available | Negative | 1665306 - 1666181 | 31074.3 |
| trm112 family protein | EBA04_RS08345 | Not Available | Negative | 1666178 - 1666447 | 9728.73 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | EBA04_RS08350 | Not Available | Positive | 1666506 - 1667009 | 17197.8 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | EBA04_RS08355 | Not Available | Positive | 1667006 - 1668151 | 40143.9 |
| superoxide dismutase | EBA04_RS08360 | Not Available | Negative | 1668293 - 1668871 | 21684.6 |
| grx4 family monothiol glutaredoxin | EBA04_RS08365 | Not Available | Positive | 1668993 - 1669313 | 12038.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

