Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase family protein | EBA04_RS00275 | Not Available | Positive | 52681 - 53871 | 42458.4 |
| duf1868 domain-containing protein | EBA04_RS00280 | Not Available | Negative | 54185 - 54970 | 29148.9 |
| tonb-dependent receptor | EBA04_RS00285 | Not Available | Negative | 54981 - 57638 | 96727.4 |
| rok family protein | EBA04_RS00290 | Not Available | Positive | 57742 - 58899 | 40904.1 |
| is5 family transposase | EBA04_RS00295 | Not Available | Positive | 58942 - 59705 | 28946.3 |
| type iii secretion system effector avirulence protein avrbs2 | EBA04_RS00300 | Not Available | Positive | 59906 - 62050 | 78610.1 |
| dipeptidase | EBA04_RS00305 | Not Available | Negative | 62539 - 63816 | 45995.9 |
| dead/deah box helicase | EBA04_RS00310 | Not Available | Negative | 64356 - 66851 | 90854.8 |
| paqr family membrane homeostasis protein trha | EBA04_RS00315 | Not Available | Positive | 67029 - 67691 | 24108.1 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | EBA04_RS00320 | Not Available | Positive | 67758 - 68015 | 9574.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

