Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBA04_RS06410 | Not Available | Positive | 1300049 - 1300402 | 12953.5 |
| type vi secretion system vgr family protein | EBA04_RS06415 | Not Available | Positive | 1300495 - 1303227 | 95436.2 |
| hypothetical protein | EBA04_RS06420 | Not Available | Positive | 1303202 - 1304074 | 33605.2 |
| t6ss effector bth_i2691 family protein | EBA04_RS06425 | Not Available | Positive | 1304094 - 1306097 | 73059.2 |
| is3 family transposase | EBA04_RS06430 | Not Available | Negative | 1306111 - 1307153 | 39945.5 |
| hypothetical protein | EBA04_RS06435 | Not Available | Positive | 1307182 - 1308168 | 34867.8 |
| duf6708 domain-containing protein | EBA04_RS06440 | Not Available | Positive | 1308357 - 1309205 | 32238.4 |
| uroporphyrinogen decarboxylase | EBA04_RS06450 | Not Available | Negative | 1309518 - 1310582 | 38544.4 |
| wgr domain-containing protein | EBA04_RS06455 | Not Available | Negative | 1310597 - 1310848 | 9495.34 |
| 3-dehydroquinate synthase | EBA04_RS06460 | Not Available | Negative | 1311148 - 1312260 | 38702.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

