Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | pv. oryzae strain CFBP7319 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859506 bp
Thymine Count
857296 bp
Guanine Count
1516697 bp
Cytosine Count
1517273 bp
Genome Length
4750772 bp
Protein-coding Genes
4098 genes
Non-Coding Genes
280 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system effector xopp | EBA04_RS05990 | Not Available | Positive | 1211309 - 1213444 | 77800.0 |
| is5 family transposase | EBA04_RS05995 | Not Available | Negative | 1213607 - 1214412 | 30249.0 |
| dipeptidase | EBA04_RS23515 | Not Available | Negative | 1214551 - 1214694 | 5550.58 |
| endou domain-containing protein | EBA04_RS23520 | Not Available | Negative | 1214699 - 1215118 | 15234.2 |
| hypothetical protein | EBA04_RS06010 | Not Available | Negative | 1215515 - 1216753 | 44421.0 |
| catalase | EBA04_RS06020 | Not Available | Negative | 1217579 - 1219684 | 76957.9 |
| dipeptidase | EBA04_RS06025 | Not Available | Negative | 1219902 - 1220196 | 10324.6 |
| type vi immunity family protein | EBA04_RS23525 | Not Available | Negative | 1220210 - 1220908 | 25507.6 |
| dipeptidase | EBA04_RS24060 | Not Available | Negative | 1220808 - 1221278 | 17777.9 |
| vrr-nuc domain-containing protein | EBA04_RS06035 | Not Available | Negative | 1221286 - 1221981 | 25630.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial blight of rice | Causes | PMC8042644 |
| Bacterial blight (bb) of rice | Causes | PMC10265122 |
| Bacterial blight of rice | Causes | PMC2432079 |
| Kresek | Causes | PMC2432079 |
| Bacterial blight | Causes | PMC6304360 |

