Pseudomonas fluorescens strain PF08

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens strain PF08 is a Gram-negative, rod-shaped bacterium characterized by its aerobic metabolism and heterotrophic energy source. It thrives in multiple habitats, reflecting its adaptability to diverse environments. This strain is mesophilic, with an optimal growth temperature of 25°C, and possesses flagella that confer motility, allowing it to navigate its surroundings effectively. PF08 has a distinctive cell arrangement, forming single cells, and is equipped with two membranes typical of Gram-negative bacteria. This strain is free-living, indicating that it does not rely on a host organism for survival, although it has been associated with various hosts, including Homo sapiens and multiple plant species such as Triticum aestivum and Solanum tuberosum. In terms of health impact, Pseudomonas fluorescens strain PF08 has been linked to bacterial infections in animals, suggesting potential pathogenicity. The diverse range of hosts it associates with, which includes various metazoans and plants, highlights its ecological versatility and potential role in both soil and plant health. The presence of Pseudomonas fluorescens in various environments and its interactions with multiple hosts underscore its significance in microbial ecology. The strain's ability to thrive as a free-living organism suggests it may play a role in nutrient cycling and contribute to the health of its ecological niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
Strainstrain PF08

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens strain PF08
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas fluorescens strain PF08 chromosome, complete genome.

Gene Summary

Adenine Count

1186356 bp

Thymine Count

1185210 bp

Guanine Count

1826767 bp

Cytosine Count

1832238 bp

Genome Length

6030573 bp

Protein-coding Genes

5253 genes

Non-Coding Genes

300 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate--cysteine ligaseD7M10_RS01095Not AvailableNegative249299 - 25088259340.4
paai family thioesteraseD7M10_RS01100Not AvailableNegative251098 - 25148113650.5
tex family proteinD7M10_RS01105Not AvailableNegative251481 - 25381785414.4
two-component system response regulator omprD7M10_RS01110Not AvailablePositive254152 - 25489227407.1
atp-binding proteinD7M10_RS01115Not AvailablePositive255009 - 25632249075.4
30s ribosomal protein s6--l-glutamate ligaseD7M10_RS01120Not AvailableNegative256452 - 25735732596.0
atp-dependent zinc proteaseD7M10_RS01125Not AvailableNegative257354 - 25780316448.1
rna-binding s4 domain-containing proteinD7M10_RS01130Not AvailablePositive258119 - 25852615091.1
phosphatase pap2 family proteinD7M10_RS01135Not AvailableNegative258568 - 25936830168.8
hsp33 family molecular chaperone hsloD7M10_RS01140Not AvailablePositive259495 - 26039733251.3

Displaying genes 511 – 520 of 5553 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial infectionsCausesPMC7578172

Displaying health effects 1 – 1 of 1 in total