Pseudomonas fluorescens strain PF08

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens strain PF08 is a Gram-negative, rod-shaped bacterium characterized by its aerobic metabolism and heterotrophic energy source. It thrives in multiple habitats, reflecting its adaptability to diverse environments. This strain is mesophilic, with an optimal growth temperature of 25°C, and possesses flagella that confer motility, allowing it to navigate its surroundings effectively. PF08 has a distinctive cell arrangement, forming single cells, and is equipped with two membranes typical of Gram-negative bacteria. This strain is free-living, indicating that it does not rely on a host organism for survival, although it has been associated with various hosts, including Homo sapiens and multiple plant species such as Triticum aestivum and Solanum tuberosum. In terms of health impact, Pseudomonas fluorescens strain PF08 has been linked to bacterial infections in animals, suggesting potential pathogenicity. The diverse range of hosts it associates with, which includes various metazoans and plants, highlights its ecological versatility and potential role in both soil and plant health. The presence of Pseudomonas fluorescens in various environments and its interactions with multiple hosts underscore its significance in microbial ecology. The strain's ability to thrive as a free-living organism suggests it may play a role in nutrient cycling and contribute to the health of its ecological niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
Strainstrain PF08

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens strain PF08
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas fluorescens strain PF08 chromosome, complete genome.

Gene Summary

Adenine Count

1186356 bp

Thymine Count

1185210 bp

Guanine Count

1826767 bp

Cytosine Count

1832238 bp

Genome Length

6030573 bp

Protein-coding Genes

5253 genes

Non-Coding Genes

300 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive117641 - 119177Not Available
Trna-ileNot AvailableNot AvailablePositive119259 - 119335Not Available
Trna-alaNot AvailableNot AvailablePositive119366 - 119441Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive119690 - 122583Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive122756 - 122871Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive122981 - 123096Not Available
methyl-accepting chemotaxis proteinD7M10_RS00605Not AvailablePositive123360 - 12524067225.0
srpbcc family proteinD7M10_RS00610Not AvailableNegative125292 - 12575316988.4
amino acid adenylation domain-containing proteinD7M10_RS00615Not AvailableNegative125777 - 129166124258.0
diiron oxygenaseD7M10_RS00620Not AvailableNegative129163 - 13011035405.6

Displaying genes 411 – 420 of 5553 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial infectionsCausesPMC7578172

Displaying health effects 1 – 1 of 1 in total