Pseudomonas fluorescens strain PF08

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens strain PF08 is a Gram-negative, rod-shaped bacterium characterized by its aerobic metabolism and heterotrophic energy source. It thrives in multiple habitats, reflecting its adaptability to diverse environments. This strain is mesophilic, with an optimal growth temperature of 25°C, and possesses flagella that confer motility, allowing it to navigate its surroundings effectively. PF08 has a distinctive cell arrangement, forming single cells, and is equipped with two membranes typical of Gram-negative bacteria. This strain is free-living, indicating that it does not rely on a host organism for survival, although it has been associated with various hosts, including Homo sapiens and multiple plant species such as Triticum aestivum and Solanum tuberosum. In terms of health impact, Pseudomonas fluorescens strain PF08 has been linked to bacterial infections in animals, suggesting potential pathogenicity. The diverse range of hosts it associates with, which includes various metazoans and plants, highlights its ecological versatility and potential role in both soil and plant health. The presence of Pseudomonas fluorescens in various environments and its interactions with multiple hosts underscore its significance in microbial ecology. The strain's ability to thrive as a free-living organism suggests it may play a role in nutrient cycling and contribute to the health of its ecological niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
Strainstrain PF08

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens strain PF08
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas fluorescens strain PF08 chromosome, complete genome.

Gene Summary

Adenine Count

1186356 bp

Thymine Count

1185210 bp

Guanine Count

1826767 bp

Cytosine Count

1832238 bp

Genome Length

6030573 bp

Protein-coding Genes

5253 genes

Non-Coding Genes

300 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative baseplate assembly proteinD7M10_RS21815Not AvailableNegative4733384 - 473371612146.6
Putative baseplate assembly protein vD7M10_RS21820Not AvailableNegative4733726 - 473433721535.6
Putative phage-related proteinD7M10_RS21825Not AvailableNegative4734342 - 473485418353.0
phage holin family proteinD7M10_RS21830Not AvailableNegative4734876 - 473522012019.9
Putative cro/ci transcriptional regulatorD7M10_RS21835Not AvailableNegative4735820 - 473654827416.3
Putative mismatch repair proteinD7M10_RS21840Not AvailablePositive4736746 - 473933795657.2
ferredoxin fdxaD7M10_RS21845Not AvailablePositive4739480 - 473980312221.4
Gp12, partition proteinD7M10_RS21850Not AvailableNegative4740302 - 474139638379.6
chromosomal replication initiator protein dnaaD7M10_RS00005Not AvailablePositive4 - 152456734.8
dna polymerase iii subunit betaD7M10_RS00010Not AvailablePositive1564 - 266740589.0

Displaying genes 291 – 300 of 5553 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial infectionsCausesPMC7578172

Displaying health effects 1 – 1 of 1 in total