Yersinia hibernica strain CFS1934

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia hibernica strain CFS1934 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This strain is notable for its genetic structure, possessing two replicons, which could play a role in its adaptability and survival in various environments. The strain is cataloged under the accession numbers NZ_CP032487.1 and NZ_CP032488.1, indicating its genetic sequence availability for further study. The presence of flagella in Y. hibernica strain CFS1934 suggests that it may exhibit enhanced movement capabilities, potentially aiding in colonization and interaction with its environment. The dual replicon system might provide a genetic advantage, allowing for more complex regulation of gene expression and metabolic functions, which could be beneficial in diverse ecological niches. Understanding the traits of Yersinia hibernica strain CFS1934 contributes to a broader comprehension of the ecological roles that such bacteria may play. Their motility and genetic adaptability could influence their interactions within microbial communities, potentially affecting nutrient cycling or disease dynamics in their habitats. Thus, studying strains like CFS1934 can offer insights into the ecological functions of bacteria in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia hibernica
Strainstrain CFS1934

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia hibernica strain CFS1934
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia hibernica strain CFS1934 plasmid pCFS1934, complete

Gene Summary

Adenine Count

15551 bp

Thymine Count

15600 bp

Guanine Count

14883 bp

Cytosine Count

14462 bp

Genome Length

60496 bp

Protein-coding Genes

57 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific integraseD5F51_RS14300Not AvailablePositive3027375 - 302864647727.7
pyridoxal phosphate-dependent aminotransferaseD5F51_RS14305Not AvailablePositive3028734 - 302989442788.1
amidohydrolaseD5F51_RS14310Not AvailablePositive3029882 - 303065228914.6
allantoate amidohydrolaseD5F51_RS14315Not AvailableNegative3030774 - 303203644672.5
pyridoxal-phosphate-dependent aminotransferase family proteinD5F51_RS14320Not AvailableNegative3032036 - 303329545754.6
amino acid abc transporter atp-binding proteinD5F51_RS14325Not AvailableNegative3033335 - 303406926917.0
amino acid abc transporter permeaseD5F51_RS14330Not AvailableNegative3034050 - 303470324301.3
amino acid abc transporter permeaseD5F51_RS14335Not AvailableNegative3034703 - 303538324844.1
transporter substrate-binding domain-containing proteinD5F51_RS14340Not AvailableNegative3035396 - 303618728435.6
murr/rpir family transcriptional regulatorD5F51_RS14345Not AvailableNegative3036548 - 303738731655.3

Displaying genes 2881 – 2890 of 4433 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.