Yersinia hibernica strain CFS1934

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia hibernica strain CFS1934 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This strain is notable for its genetic structure, possessing two replicons, which could play a role in its adaptability and survival in various environments. The strain is cataloged under the accession numbers NZ_CP032487.1 and NZ_CP032488.1, indicating its genetic sequence availability for further study. The presence of flagella in Y. hibernica strain CFS1934 suggests that it may exhibit enhanced movement capabilities, potentially aiding in colonization and interaction with its environment. The dual replicon system might provide a genetic advantage, allowing for more complex regulation of gene expression and metabolic functions, which could be beneficial in diverse ecological niches. Understanding the traits of Yersinia hibernica strain CFS1934 contributes to a broader comprehension of the ecological roles that such bacteria may play. Their motility and genetic adaptability could influence their interactions within microbial communities, potentially affecting nutrient cycling or disease dynamics in their habitats. Thus, studying strains like CFS1934 can offer insights into the ecological functions of bacteria in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia hibernica
Strainstrain CFS1934

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia hibernica strain CFS1934
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia hibernica strain CFS1934 plasmid pCFS1934, complete

Gene Summary

Adenine Count

15551 bp

Thymine Count

15600 bp

Guanine Count

14883 bp

Cytosine Count

14462 bp

Genome Length

60496 bp

Protein-coding Genes

57 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-3D5F51_RS07765Not AvailablePositive1644214 - 164476520907.5
50s ribosomal protein l35D5F51_RS07770Not AvailablePositive1644862 - 16450597319.34
50s ribosomal protein l20D5F51_RS07775Not AvailablePositive1645097 - 164545313559.8
phenylalanine--trna ligase subunit alphaD5F51_RS07785Not AvailablePositive1645881 - 164686437085.3
phenylalanine--trna ligase subunit betaD5F51_RS07790Not AvailablePositive1646879 - 164926687168.9
integration host factor subunit alphaD5F51_RS07795Not AvailablePositive1649271 - 164956711200.5
tm2 domain-containing proteinD5F51_RS07800Not AvailableNegative1649790 - 165008610981.5
duf2502 domain-containing proteinD5F51_RS07805Not AvailablePositive1650710 - 165120118424.9
vitamin b12 abc transporter permease btucD5F51_RS07810Not AvailablePositive1651401 - 165240836216.1
glutathione peroxidaseD5F51_RS07815Not AvailablePositive1652478 - 165303220447.4

Displaying genes 1651 – 1660 of 4433 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.