Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernae |
| Strain | strain K2W31S-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
879277 bp
Thymine Count
876930 bp
Guanine Count
1593664 bp
Cytosine Count
1599744 bp
Genome Length
4949615 bp
Protein-coding Genes
4424 genes
Non-Coding Genes
93 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | D3880_RS04370 | Not Available | Negative | 949718 - 950197 | 17630.5 |
| polynucleotide adenylyltransferase pcnb | D3880_RS04375 | Not Available | Negative | 950199 - 951605 | 53024.5 |
| sigma-54-dependent transcriptional regulator | D3880_RS04380 | Not Available | Negative | 952283 - 953719 | 52737.0 |
| sensor histidine kinase | D3880_RS04385 | Not Available | Negative | 953724 - 956696 | 109139.0 |
| hypothetical protein | D3880_RS04390 | Not Available | Negative | 956680 - 956856 | 6977.75 |
| trna glutamyl-q(34) synthetase gluqrs | D3880_RS04395 | Not Available | Negative | 956940 - 957827 | 32965.3 |
| rna polymerase-binding protein dksa | D3880_RS04400 | Not Available | Negative | 957873 - 958316 | 17060.3 |
| pyridoxal phosphate-dependent aminotransferase | D3880_RS04405 | Not Available | Positive | 958512 - 959693 | 43069.3 |
| dna/rna nuclease sfsa | D3880_RS04410 | Not Available | Positive | 959683 - 960390 | 25642.9 |
| rieske (2fe-2s) protein | D3880_RS04415 | Not Available | Negative | 960445 - 960762 | 11407.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





