Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernae |
| Strain | strain K2W31S-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
879277 bp
Thymine Count
876930 bp
Guanine Count
1593664 bp
Cytosine Count
1599744 bp
Genome Length
4949615 bp
Protein-coding Genes
4424 genes
Non-Coding Genes
93 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | D3880_RS18815 | Not Available | Negative | 4138231 - 4138779 | 20150.7 |
| duf1631 domain-containing protein | D3880_RS18820 | Not Available | Negative | 4139218 - 4141524 | 84562.0 |
| carboxylating nicotinate-nucleotide diphosphorylase | D3880_RS18825 | Not Available | Positive | 4141943 - 4142791 | 30266.5 |
| abc transporter atp-binding protein | D3880_RS18830 | Not Available | Negative | 4143013 - 4143921 | 33506.6 |
| hypothetical protein | D3880_RS18835 | Not Available | Negative | 4143918 - 4144739 | 30375.6 |
| hypothetical protein | D3880_RS18840 | Not Available | Negative | 4144760 - 4145569 | 29082.8 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | D3880_RS23220 | Not Available | Negative | 4146271 - 4146456 | 6546.23 |
| type iv-a pilus assembly atpase pilb | D3880_RS18850 | Not Available | Positive | 4146683 - 4148386 | 62555.4 |
| type ii secretion system f family protein | D3880_RS18855 | Not Available | Positive | 4148516 - 4149733 | 44289.7 |
| prepilin peptidase | D3880_RS18860 | Not Available | Positive | 4149736 - 4150608 | 31617.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





