Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernae |
| Strain | strain K2W31S-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
879277 bp
Thymine Count
876930 bp
Guanine Count
1593664 bp
Cytosine Count
1599744 bp
Genome Length
4949615 bp
Protein-coding Genes
4424 genes
Non-Coding Genes
93 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine abc transporter substrate-binding protein | D3880_RS12940 | Not Available | Positive | 2831678 - 2832535 | 31188.8 |
| transcriptional regulator beti | D3880_RS12945 | Not Available | Positive | 2832704 - 2833330 | 22855.6 |
| bcct family transporter | D3880_RS12950 | Not Available | Negative | 2833492 - 2835030 | 55597.4 |
| betaine-aldehyde dehydrogenase | D3880_RS12955 | Not Available | Positive | 2835468 - 2836940 | 53027.2 |
| choline dehydrogenase | D3880_RS12960 | Not Available | Positive | 2837096 - 2838784 | 61726.2 |
| formaldehyde dehydrogenase, glutathione-independent | D3880_RS12965 | Not Available | Negative | 2839384 - 2840583 | 41957.6 |
| formyltetrahydrofolate deformylase | D3880_RS12970 | Not Available | Negative | 2840823 - 2841686 | 32650.2 |
| sarcosine oxidase subunit gamma | D3880_RS12975 | Not Available | Negative | 2841878 - 2842507 | 22737.3 |
| sarcosine oxidase subunit alpha | D3880_RS12980 | Not Available | Negative | 2842500 - 2845532 | 109860.0 |
| sarcosine oxidase subunit delta | D3880_RS12985 | Not Available | Negative | 2845529 - 2845840 | 11861.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





