Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernae |
| Strain | strain K2W31S-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
879277 bp
Thymine Count
876930 bp
Guanine Count
1593664 bp
Cytosine Count
1599744 bp
Genome Length
4949615 bp
Protein-coding Genes
4424 genes
Non-Coding Genes
93 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase | D3880_RS01175 | Not Available | Positive | 252737 - 253531 | 29810.9 |
| lysr family transcriptional regulator | D3880_RS01180 | Not Available | Positive | 253546 - 254406 | 31481.3 |
| putative 2-aminoethylphosphonate abc transporter atp-binding protein | D3880_RS01185 | Not Available | Positive | 254656 - 255711 | 38244.0 |
| putative 2-aminoethylphosphonate abc transporter permease subunit | D3880_RS01190 | Not Available | Positive | 255725 - 257431 | 61135.2 |
| putative 2-aminoethylphosphonate abc transporter substrate-binding protein | D3880_RS01195 | Not Available | Positive | 257470 - 258489 | 37130.2 |
| tigr03364 family fad-dependent oxidoreductase | D3880_RS01200 | Not Available | Positive | 258726 - 259874 | 40995.4 |
| phosphonate degradation hd-domain oxygenase | D3880_RS01205 | Not Available | Positive | 260020 - 260586 | 20429.4 |
| duf3482 domain-containing protein | D3880_RS01210 | Not Available | Negative | 260765 - 262138 | 49490.5 |
| duf2868 domain-containing protein | D3880_RS01215 | Not Available | Negative | 262295 - 263665 | 48602.5 |
| 3'-5' exonuclease | D3880_RS01220 | Not Available | Negative | 263662 - 265512 | 68985.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





