Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernae |
| Strain | strain K2W31S-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
879277 bp
Thymine Count
876930 bp
Guanine Count
1593664 bp
Cytosine Count
1599744 bp
Genome Length
4949615 bp
Protein-coding Genes
4424 genes
Non-Coding Genes
93 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntp family permease | D3880_RS11250 | Not Available | Negative | 2443234 - 2444625 | 48425.4 |
| oprd family porin | D3880_RS11255 | Not Available | Negative | 2444830 - 2446107 | 46361.0 |
| sigma-54 interaction domain-containing protein | D3880_RS11260 | Not Available | Negative | 2446406 - 2447839 | 52052.8 |
| hydroxymethylglutaryl-coa lyase | D3880_RS11265 | Not Available | Negative | 2447975 - 2448871 | 31408.7 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | D3880_RS11270 | Not Available | Negative | 2449062 - 2451086 | 71895.8 |
| gamma-carboxygeranoyl-coa hydratase | D3880_RS11275 | Not Available | Negative | 2451229 - 2452026 | 28790.6 |
| carboxyl transferase domain-containing protein | D3880_RS11280 | Not Available | Negative | 2452031 - 2453638 | 57855.5 |
| isovaleryl-coa dehydrogenase | D3880_RS11285 | Not Available | Negative | 2453832 - 2454995 | 42146.6 |
| merr family transcriptional regulator | D3880_RS11290 | Not Available | Negative | 2455025 - 2455423 | 15448.7 |
| sigma-54-dependent fis family transcriptional regulator | D3880_RS11295 | Not Available | Positive | 2455643 - 2457547 | 69248.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





