Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernae |
| Strain | strain K2W31S-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
879277 bp
Thymine Count
876930 bp
Guanine Count
1593664 bp
Cytosine Count
1599744 bp
Genome Length
4949615 bp
Protein-coding Genes
4424 genes
Non-Coding Genes
93 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna-binding domain-containing protein | D3880_RS22710 | Not Available | Negative | 2196766 - 2197368 | 22252.8 |
| Transposase | D3880_RS10180 | Not Available | Negative | 2197374 - 2198087 | 26527.0 |
| Transposase | D3880_RS10185 | Not Available | Negative | 2198110 - 2200116 | 75399.7 |
| dna polymerase iii subunit beta | D3880_RS00010 | Not Available | Positive | 1488 - 2591 | 40464.9 |
| dna replication/repair protein recf | D3880_RS00015 | Not Available | Positive | 2613 - 3713 | 41143.5 |
| dna topoisomerase (atp-hydrolyzing) subunit b | D3880_RS00020 | Not Available | Positive | 3710 - 6130 | 90092.1 |
| lysophospholipid acyltransferase family protein | D3880_RS00025 | Not Available | Negative | 6217 - 6987 | 28189.3 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | D3880_RS00030 | Not Available | Negative | 6995 - 7534 | 18999.7 |
| glycine--trna ligase subunit beta | D3880_RS00035 | Not Available | Negative | 7587 - 9641 | 74159.0 |
| glycine--trna ligase subunit alpha | D3880_RS00040 | Not Available | Negative | 9638 - 10585 | 35961.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





